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Improving statistical learning methods via features selection without replacement sampling and random projection

Published: May 28, 2025 | arXiv ID: 2506.00053v1

By: Sulaiman khan , Muhammad Ahmad , Fida Ullah and more

Potential Business Impact:

Finds cancer genes better for new treatments.

Business Areas:
Bioinformatics Biotechnology, Data and Analytics, Science and Engineering

Cancer is fundamentally a genetic disease characterized by genetic and epigenetic alterations that disrupt normal gene expression, leading to uncontrolled cell growth and metastasis. High-dimensional microarray datasets pose challenges for classification models due to the "small n, large p" problem, resulting in overfitting. This study makes three different key contributions: 1) we propose a machine learning-based approach integrating the Feature Selection Without Re-placement (FSWOR) technique and a projection method to improve classification accuracy. 2) We apply the Kendall statistical test to identify the most significant genes from the brain cancer mi-croarray dataset (GSE50161), reducing the feature space from 54,675 to 20,890 genes.3) we apply machine learning models using k-fold cross validation techniques in which our model incorpo-rates ensemble classifiers with LDA projection and Na\"ive Bayes, achieving a test score of 96%, outperforming existing methods by 9.09%. The results demonstrate the effectiveness of our ap-proach in high-dimensional gene expression analysis, improving classification accuracy while mitigating overfitting. This study contributes to cancer biomarker discovery, offering a robust computational method for analyzing microarray data.

Repos / Data Links

Page Count
17 pages

Category
Quantitative Biology:
Quantitative Methods