Exchangeable Gaussian Processes with application to epidemics
By: Lampros Bouranis , Petros Barmpounakis , Nikolaos Demiris and more
We develop a Bayesian non-parametric framework based on multi-task Gaussian processes, appropriate for temporal shrinkage. We focus on a particular class of dynamic hierarchical models to obtain evidence-based knowledge of infectious disease burden. These models induce a parsimonious way to capture cross-dependence between groups while retaining a natural interpretation based on an underlying mean process, itself expressed as a Gaussian process. We analyse distinct types of outbreak data from recent epidemics and find that the proposed models result in improved predictive ability against competing alternatives.
Similar Papers
Gaussian approximations for fast Bayesian inference of partially observed branching processes with applications to epidemiology
Methodology
Makes tracking disease spread much faster.
Gaussian process priors with Markov properties for effective reproduction number inference
Methodology
Better predicts how diseases spread.
A computationally efficient framework for realistic epidemic modelling through Gaussian Markov random fields
Computation
Predicts disease spread better with outside factors.