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MedNuggetizer: Confidence-Based Information Nugget Extraction from Medical Documents

Published: December 17, 2025 | arXiv ID: 2512.15384v1

By: Gregor Donabauer , Samy Ateia , Udo Kruschwitz and more

We present MedNuggetizer, https://mednugget-ai.de/; access is available upon request.}, a tool for query-driven extraction and clustering of information nuggets from medical documents to support clinicians in exploring underlying medical evidence. Backed by a large language model (LLM), \textit{MedNuggetizer} performs repeated extractions of information nuggets that are then grouped to generate reliable evidence within and across multiple documents. We demonstrate its utility on the clinical use case of \textit{antibiotic prophylaxis before prostate biopsy} by using major urological guidelines and recent PubMed studies as sources of information. Evaluation by domain experts shows that \textit{MedNuggetizer} provides clinicians and researchers with an efficient way to explore long documents and easily extract reliable, query-focused medical evidence.

Category
Computer Science:
Information Retrieval